PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061380.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRAS

Protein Properties

Length: 207aa MW: 23081.9 Da PI: 5.3853

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	82.8	5.7e-26	59	181	65	185
GRAS 65 ppsetseknsseelaalklfsevsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....s 154 + + +ek+s++ aa+k+f++++P+ +f+h+taN aIlea+ + e+vHi+Df++ +G+QWp++++a a ++ l++T ++ + + XP_028061380.1 59 QGEYLREKSSKNFEAAFKAFYQIFPYGRFAHFTANLAILEAIPDDaETVHIVDFNMREGIQWPPMIEAVARLQK---ALKLTSIKTRDDSgdapV 150 3333445568889999************************8877*******************98644...6***9877788888 PP GRAS 155 keeleetgerLakfAeelgvpfefnvlvakr 185 + + e+t+++L + A++ g++++ + + ++ XP_028061380.1 151 HWSFEKTKRQLCDRARSSGLNLKVEEVGIDD 181 899*****************999874333 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MKVGDGGFGL WSITVGSQRD SVCRNSSNSD SSSITEKVSP IGETLERLAF NLFQSEENQG 60 EYLREKSSKN FEAAFKAFYQ IFPYGRFAHF TANLAILEAI PDDAETVHIV DFNMREGIQW 120 PPMIEAVARL QKALKLTSIK TRDDSGDAPV HWSFEKTKRQ LCDRARSSGL NLKVEEVGID 180 DLTSEIKKMT VFSSGSNDRT SIVSSIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66770.1	4e-14	GRAS family protein