PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061149.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 385aa    MW: 44418.3 Da    PI: 9.4916
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.11.9e-19311131098
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     ++  ++l +p kfa++  +k++ +  +tl+ +sg +W+v l    ++++ +++ GWk Fv+ + L+e D+++Fk++g+s+f   v +f+
  XP_028061149.1  31 TGFDQQLAIPQKFANN--LKEKLPENVTLKGPSGAKWNVGL--ITSGDTLFFKHGWKTFVENHSLEEDDVLIFKYNGDSGF--DVLIFD 113
                     455678********44..45668889***************..999999****************************9999..888887 PP
2B349.11.1e-15255354197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.....-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.....rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.s 88 
                     f+ v+ ps+v k   +++p + a++h   +++s++++l+ +++     ++W  ++ yr ++g+  lt+GW++F+ +n+L+e D+++F+l  g+ +
  XP_028061149.1 255 FIVVMRPSHVYKGFYMSIPSEWATSHL--PRKSQEVILRVKENicvkeNTWHARFYYRVYGGG--LTGGWRNFAVENNLEEFDVCLFELAsGTnD 345
                     7899**********************6..4567789999999999999*******99****99..9**********************8845555 PP

                     EE..EEEEE CS
              B3  89 efelvvkvf 97 
                     + +++v+++
  XP_028061149.1 346 TISMNVSIY 354
                     556666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MGEECRNCRK WEEDMYWTHF QSILFCQFLS TGFDQQLAIP QKFANNLKEK LPENVTLKGP  60
SGAKWNVGLI TSGDTLFFKH GWKTFVENHS LEEDDVLIFK YNGDSGFDVL IFDGRSLCER  120
EASYFVRKCG HTELDGGCRT KKNMRESSVE VMHDSSHYVV DRTPSKRLRK DDNLMPVLSR  180
FRGRTRKGDN SSRPHHSKWD MRSREPSTSA VGPKVNPGTV GAYPLQYVSS RRSITEEEKD  240
KALQMAHASS TKDSFIVVMR PSHVYKGFYM SIPSEWATSH LPRKSQEVIL RVKENICVKE  300
NTWHARFYYR VYGGGLTGGW RNFAVENNLE EFDVCLFELA SGTNDTISMN VSIYRVIEEI  360
RPLTRMTPPS STRGKNSKYL RRKRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-74B3 family protein