PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061136.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 572aa MW: 63963.2 Da PI: 8.9569

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.6	4.8e-18	15	99	9	99
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++s rl +p +f+++ +gk+++ t++l +sg++W v l ++ + ++ +GW Fv+++ + gD++vF++dg+ +f +v+vf++ XP_028061136.1 15 PTTSSERLKIPSRFIKHLEGKTNG--TVSLLGPSGNTWHVDL--IQYNDNLFFHDGWAAFVQDHFMVHGDTMVFRYDGSLRF--TVQVFDH 99 5678899******777888655..9***********..8888899*********************986555..9*997 PP
2	B3	52.8	7e-17	238	331	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f k++++ +v+ s l +p +f +h ++++++++l++++g+sW+v+ k ++++ +GW Fv++n+++ gD+++F+l+g+ e l+v XP_028061136.1 238 FTKTMKRFNVSGSYTLNIPYQFSMAHF--PKCKVKIVLRNLKGESWTVNSVPtIKVHMSHTFCGGWMAFVRDNNINMGDICIFELVGKCE--LCV 328 889999999***********99998..45999***********965445555699999*******************99544..477 PP EEE CS B3 95 kvf 97 ++ XP_028061136.1 329 YIL 331 765 PP
3	B3	40.3	5.5e-13	470	547	11	89
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 + s l +p +f +h + ++++++l++++g+ W+v+ + + ++ +++ +GW Fv+ n+++ gD+++F+l+g e XP_028061136.1 470 SGSYTLKVPYQFSMAHL--PSCKTEIVLRNLRGQCWTVNSVPSTRVQTlHTFCGGWMAFVRGNDIQMGDICIFELIGICE 547 55667999**98885..45889************5544444479999*******************998544 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MLNAKRPHFF EGFNPTTSSE RLKIPSRFIK HLEGKTNGTV SLLGPSGNTW HVDLIQYNDN 60 LFFHDGWAAF VQDHFMVHGD TMVFRYDGSL RFTVQVFDHS SCEKEAAFNA ECSQDPNQFD 120 ELMGRKRDRV GGDSFLDGIF EHVPKKIRGS QVNSEYIAKN QEGWQHDDVA SATEICPATI 180 YAHETGNYCS PSKNAVSVAM PLQSIVPKGN SEARCMLTLS ASEAEGLARS FTSCYPNFTK 240 TMKRFNVSGS YTLNIPYQFS MAHFPKCKVK IVLRNLKGES WTVNSVPTIK VHMSHTFCGG 300 WMAFVRDNNI NMGDICIFEL VGKCELCVYI LNVGKEGLEC QNGKPTFKAL INGCAATSHK 360 ISERLPKKMR GNASKVSLQL ITRVEMSDKK AFNREDKAND RPSKSSAFCS QLKASGKSAI 420 RNKISIEENQ GSYTRGCMSM KSAPEEKRAA QSFVSNLPHF VRVMKKFNIS GSYTLKVPYQ 480 FSMAHLPSCK TEIVLRNLRG QCWTVNSVPS TRVQTLHTFC GGWMAFVRGN DIQMGDICIF 540 ELIGICEMRV YISGVGKKGL DYQSGKVTSN EL

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MLNAKRPHFF EGFNPTTSSE RLKIPSRFIK HLEGKTNGTV SLLGPSGNTW HVDLIQYNDN  60
LFFHDGWAAF VQDHFMVHGD TMVFRYDGSL RFTVQVFDHS SCEKEAAFNA ECSQDPNQFD  120
ELMGRKRDRV GGDSFLDGIF EHVPKKIRGS QVNSEYIAKN QEGWQHDDVA SATEICPATI  180
YAHETGNYCS PSKNAVSVAM PLQSIVPKGN SEARCMLTLS ASEAEGLARS FTSCYPNFTK  240
TMKRFNVSGS YTLNIPYQFS MAHFPKCKVK IVLRNLKGES WTVNSVPTIK VHMSHTFCGG  300
WMAFVRDNNI NMGDICIFEL VGKCELCVYI LNVGKEGLEC QNGKPTFKAL INGCAATSHK  360
ISERLPKKMR GNASKVSLQL ITRVEMSDKK AFNREDKAND RPSKSSAFCS QLKASGKSAI  420
RNKISIEENQ GSYTRGCMSM KSAPEEKRAA QSFVSNLPHF VRVMKKFNIS GSYTLKVPYQ  480
FSMAHLPSCK TEIVLRNLRG QCWTVNSVPS TRVQTLHTFC GGWMAFVRGN DIQMGDICIF  540
ELIGICEMRV YISGVGKKGL DYQSGKVTSN EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	5e-17	B3 family protein