PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061129.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 579aa MW: 64676.3 Da PI: 9.054

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.1	5e-16	30	106	17	99
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +p +f+++ +gk+++ t++l +sg++W v l ++ + ++ +GW Fv+++ + gD++vF++dg+ +f +v+vf++ XP_028061129.1 30 KIPSRFIKHLEGKTNG--TVSLLGPSGNTWHVDL--IQYNDNLFFHDGWAAFVQDHFMVHGDTMVFRYDGSLRF--TVQVFDH 106 59***777888655..9***********..8888899*********************986555..9*997 PP
2	B3	52.8	7.1e-17	245	338	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f k++++ +v+ s l +p +f +h ++++++++l++++g+sW+v+ k ++++ +GW Fv++n+++ gD+++F+l+g+ e l+v XP_028061129.1 245 FTKTMKRFNVSGSYTLNIPYQFSMAHF--PKCKVKIVLRNLKGESWTVNSVPtIKVHMSHTFCGGWMAFVRDNNINMGDICIFELVGKCE--LCV 335 889999999***********99998..45999***********965445555699999*******************99544..477 PP EEE CS B3 95 kvf 97 ++ XP_028061129.1 336 YIL 338 765 PP
3	B3	40.3	5.6e-13	477	554	11	89
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 + s l +p +f +h + ++++++l++++g+ W+v+ + + ++ +++ +GW Fv+ n+++ gD+++F+l+g e XP_028061129.1 477 SGSYTLKVPYQFSMAHL--PSCKTEIVLRNLRGQCWTVNSVPSTRVQTlHTFCGGWMAFVRGNDIQMGDICIFELIGICE 554 55667999**98885..45889************5544444479999*******************998544 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MRRGLTSSRV LTLLRALNDC GTILMFLLQK IPSRFIKHLE GKTNGTVSLL GPSGNTWHVD 60 LIQYNDNLFF HDGWAAFVQD HFMVHGDTMV FRYDGSLRFT VQVFDHSSCE KEAAFNAECS 120 QDPNQFDELM GRKRDRVGGD SFLDGIFEHV PKKIRGSQVN SEYIAKNQEG WQHDDVASAT 180 EICPATIYAH ETGNYCSPSK NAVSVAMPLQ SIVPKGNSEA RCMLTLSASE AEGLARSFTS 240 CYPNFTKTMK RFNVSGSYTL NIPYQFSMAH FPKCKVKIVL RNLKGESWTV NSVPTIKVHM 300 SHTFCGGWMA FVRDNNINMG DICIFELVGK CELCVYILNV GKEGLECQNG KPTFKALING 360 CAATSHKISE RLPKKMRGNA SKVSLQLITR VEMSDKKAFN REDKANDRPS KSSAFCSQLK 420 ASGKSAIRNK ISIEENQGSY TRGCMSMKSA PEEKRAAQSF VSNLPHFVRV MKKFNISGSY 480 TLKVPYQFSM AHLPSCKTEI VLRNLRGQCW TVNSVPSTRV QTLHTFCGGW MAFVRGNDIQ 540 MGDICIFELI GICEMRVYIS GVGKKGLDYQ SGKVTSNEL

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MRRGLTSSRV LTLLRALNDC GTILMFLLQK IPSRFIKHLE GKTNGTVSLL GPSGNTWHVD  60
LIQYNDNLFF HDGWAAFVQD HFMVHGDTMV FRYDGSLRFT VQVFDHSSCE KEAAFNAECS  120
QDPNQFDELM GRKRDRVGGD SFLDGIFEHV PKKIRGSQVN SEYIAKNQEG WQHDDVASAT  180
EICPATIYAH ETGNYCSPSK NAVSVAMPLQ SIVPKGNSEA RCMLTLSASE AEGLARSFTS  240
CYPNFTKTMK RFNVSGSYTL NIPYQFSMAH FPKCKVKIVL RNLKGESWTV NSVPTIKVHM  300
SHTFCGGWMA FVRDNNINMG DICIFELVGK CELCVYILNV GKEGLECQNG KPTFKALING  360
CAATSHKISE RLPKKMRGNA SKVSLQLITR VEMSDKKAFN REDKANDRPS KSSAFCSQLK  420
ASGKSAIRNK ISIEENQGSY TRGCMSMKSA PEEKRAAQSF VSNLPHFVRV MKKFNISGSY  480
TLKVPYQFSM AHLPSCKTEI VLRNLRGQCW TVNSVPSTRV QTLHTFCGGW MAFVRGNDIQ  540
MGDICIFELI GICEMRVYIS GVGKKGLDYQ SGKVTSNEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	5e-16	B3 family protein