PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028061120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 579aa MW: 64676.3 Da PI: 9.054 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.1 | 5e-16 | 30 | 106 | 17 | 99 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +p +f+++ +gk+++ t++l +sg++W v l ++ + ++ +GW Fv+++ + gD++vF++dg+ +f +v+vf++ XP_028061120.1 30 KIPSRFIKHLEGKTNG--TVSLLGPSGNTWHVDL--IQYNDNLFFHDGWAAFVQDHFMVHGDTMVFRYDGSLRF--TVQVFDH 106 59*****777888655..9***************..8888899*************************986555..9***997 PP | |||||||
2 | B3 | 52.8 | 7.1e-17 | 245 | 338 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f k++++ +v+ s l +p +f +h ++++++++l++++g+sW+v+ k ++++ +GW Fv++n+++ gD+++F+l+g+ e l+v XP_028061120.1 245 FTKTMKRFNVSGSYTLNIPYQFSMAHF--PKCKVKIVLRNLKGESWTVNSVPtIKVHMSHTFCGGWMAFVRDNNINMGDICIFELVGKCE--LCV 335 889999999*************99998..45999***************965445555699999*********************99544..477 PP EEE CS B3 95 kvf 97 ++ XP_028061120.1 336 YIL 338 765 PP | |||||||
3 | B3 | 40.3 | 5.6e-13 | 477 | 554 | 11 | 89 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 + s l +p +f +h + ++++++l++++g+ W+v+ + + ++ +++ +GW Fv+ n+++ gD+++F+l+g e XP_028061120.1 477 SGSYTLKVPYQFSMAHL--PSCKTEIVLRNLRGQCWTVNSVPSTRVQTlHTFCGGWMAFVRGNDIQMGDICIFELIGICE 554 55667999****98885..45889****************5544444479999*********************998544 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 579 aa Download sequence |
MRRGLTSSRV LTLLRALNDC GTILMFLLQK IPSRFIKHLE GKTNGTVSLL GPSGNTWHVD 60 LIQYNDNLFF HDGWAAFVQD HFMVHGDTMV FRYDGSLRFT VQVFDHSSCE KEAAFNAECS 120 QDPNQFDELM GRKRDRVGGD SFLDGIFEHV PKKIRGSQVN SEYIAKNQEG WQHDDVASAT 180 EICPATIYAH ETGNYCSPSK NAVSVAMPLQ SIVPKGNSEA RCMLTLSASE AEGLARSFTS 240 CYPNFTKTMK RFNVSGSYTL NIPYQFSMAH FPKCKVKIVL RNLKGESWTV NSVPTIKVHM 300 SHTFCGGWMA FVRDNNINMG DICIFELVGK CELCVYILNV GKEGLECQNG KPTFKALING 360 CAATSHKISE RLPKKMRGNA SKVSLQLITR VEMSDKKAFN REDKANDRPS KSSAFCSQLK 420 ASGKSAIRNK ISIEENQGSY TRGCMSMKSA PEEKRAAQSF VSNLPHFVRV MKKFNISGSY 480 TLKVPYQFSM AHLPSCKTEI VLRNLRGQCW TVNSVPSTRV QTLHTFCGGW MAFVRGNDIQ 540 MGDICIFELI GICEMRVYIS GVGKKGLDYQ SGKVTSNEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33280.1 | 5e-16 | B3 family protein |