PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 195aa MW: 22464.1 Da PI: 4.6808 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 132.6 | 4.4e-41 | 2 | 189 | 183 | 373 |
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 +++++dl+ + ++v+ gEa+aV + l ++ ++++ le +++++++ P v+vv+e ea+ ++++F++r++eal +y ++fd++ea + + XP_028061077.1 2 VSNIDDLKEDVFEVEAGEAIAVYCPWFLRTMTSQPHRLEA----LMRVIRNRFPCVMVVTEIEANSDAPTFMDRIMEALFFYGSVFDCFEACIDP 92 578999*9***********************988888888....*************************************************** PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371 + +ri++E+++++ +i+++v eg+er+ rh ++ W + + ++ + + +ls++ qakl+ rk++ + +++ + ++l++gWk+ p+ svS XP_028061077.1 93 CNPNRITIEAMYMRYAIRSIVISEGEERTTRHMKVDAWTDLFARFKMVETELSSSCLYQAKLMARKFGcESCCTIDMNGKCLLIGWKGTPISSVS 187 ********************************************************************8888*********************** PP GRAS 372 aW 373 aW XP_028061077.1 188 AW 189 ** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MVSNIDDLKE DVFEVEAGEA IAVYCPWFLR TMTSQPHRLE ALMRVIRNRF PCVMVVTEIE 60 ANSDAPTFMD RIMEALFFYG SVFDCFEACI DPCNPNRITI EAMYMRYAIR SIVISEGEER 120 TTRHMKVDAW TDLFARFKMV ETELSSSCLY QAKLMARKFG CESCCTIDMN GKCLLIGWKG 180 TPISSVSAWY FLQEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 9e-29 | GRAS family protein |