PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YB | ||||||||
Protein Properties | Length: 144aa MW: 16292.2 Da PI: 5.0919 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 167.1 | 2.2e-52 | 3 | 98 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 eqdr+lPianv+rimk++lP akisk+aket+qec+sefisfvt+easdkc++e+rkt+ngdd++wal++lGf+dy+e++ yl+kyre+e+ek XP_028060827.1 3 DEQDRLLPIANVGRIMKQILPPSAKISKEAKETMQECASEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDDYAEAIVRYLHKYREFEREK 98 69*******************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MVDEQDRLLP IANVGRIMKQ ILPPSAKISK EAKETMQECA SEFISFVTGE ASDKCHKENR 60 KTVNGDDICW ALSSLGFDDY AEAIVRYLHK YREFEREKAN QNKASSSTED KDEASNYKGN 120 IQLSKHTDSP TPLEFRVLEK GESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 1e-60 | NF-YB family protein |