PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059867.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 322aa MW: 37542.3 Da PI: 8.6305

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.5	3e-20	62	120	3	56
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+++t+eqle+Leel+++ r+psa+++ +++++l +++ ++V++WFqN++a+++ XP_028059867.1 62 SRWNPTPEQLEALEELYRRgIRTPSADQIHHITAQLrqygKIEGKNVFYWFQNHKARDR 120 7***************99***********************************98 PP
2	Wus_type_Homeobox	111	6.6e-36	61	122	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+PtpeQ++ Leely++G+rtP++++i++ita+L++yGkie+kNVfyWFQN+kaR+r + XP_028059867.1 61 SSRWNPTPEQLEALEELYRRGIRTPSADQIHHITAQLRQYGKIEGKNVFYWFQNHKARDRYH 122 79*********************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MWMIGYNKNK NNRELISIPE PVSFNGGNHR PLIPWPCPCP EVEQSKREWK WLNRQEVSVV 60 SSRWNPTPEQ LEALEELYRR GIRTPSADQI HHITAQLRQY GKIEGKNVFY WFQNHKARDR 120 YHKRRRQVES ASHQEYCDIE ATEKEESEAS RRTGFEQIKN WAFPINCSTF AEKNASTIQG 180 GQAKTAVEEC ITDHRWVQLY EGGKLSHQRR NLCRSRIDLC QCGSKMMQPS SCSPLPTHLI 240 NNTNTNTSIT MDPAKLKKST HHNHQDLKMF IAPATPRDDQ TLQLFPRRSN ITEKDETAEI 300 SLAAMNPDFT PYQFFEFLPL KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-43	WOX family protein