PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NAC | ||||||||
Protein Properties | Length: 210aa MW: 24992.8 Da PI: 10.2084 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.4 | 2.3e-52 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi ++d+y++ePwd++ ++e+++wyfFs++dkky+tg+r+nrat++g+Wkat +dk+v XP_028059366.1 7 VPPGFRFHPTEEELVGYYLKQKINSLKIDL-DVIVDIDLYRIEPWDIQDrcrLGYEEQSKWYFFSHKDKKYPTGTRTNRATAAGFWKATRRDKAV 100 69****************************.99**************943432233566************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ls k++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_028059366.1 101 LS-KNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRL 135 **.8999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MEMESCVPPG FRFHPTEEEL VGYYLKQKIN SLKIDLDVIV DIDLYRIEPW DIQDRCRLGY 60 EEQSKWYFFS HKDKKYPTGT RTNRATAAGF WKATRRDKAV LSKNRIIGMR KTLVFYKGRA 120 PNGRKSDWIM HEYRLQTFEH APPQASSINS LQHNKCFQVF LIKITSKLNG KQCQEHKWKT 180 NFYNFLVRTT KYYPITASRL QKYTPLIPHT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 2e-70 | NAC family protein |