PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 376aa MW: 41171.6 Da PI: 6.1912 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.5 | 1.6e-10 | 219 | 267 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq XP_028059274.1 219 NSHSLAERVRRERISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 267 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MGTDEDRANM GFQHRNGDNS MFISSSGADH PFFGSGWDPL VSLSQSENFE GSSVIPHTFG 60 VHYPSDSGLV DMVPKLPPCF GSGSFSEMVG SFGQPECGQT ARTEKTSTNG APPQGDQQIS 120 EEGTLGISHS GKRKKRVSES NSPFNPSKNG EGEQEKDISA ESSEYQKEQD EKKQKIDQNM 180 SVNLRGKQTG KQAKDNSSNG DASKENYIHV RARRGQATNS HSLAERVRRE RISERMKLLQ 240 ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV NPQLNVDIDR IISKEILHLR 300 GSGAAIPGFD PGSSSSHLYP LGIQQGTFPG IPSASPFHLM PQNVWDNDLQ SFLQMGFDSN 360 PAISNLEPNG RSKLER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-71 | bHLH family protein |