PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058237.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 333aa MW: 38278 Da PI: 6.4279

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.7	3.7e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++ + ++i +vd++kvePwdLp+k+k + +ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_028058237.1 16 LPPGFRFHPTDEELITHYLSHKVLESSFCA-RAIGDVDLNKVEPWDLPRKAKMGGREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIYR- 108 79***********************998.89***********999999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg+kktLvfykgrapkgekt+Wvmheyrle XP_028058237.1 109 VKTLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142 8899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MEKGSGICRD DEQMELPPGF RFHPTDEELI THYLSHKVLE SSFCARAIGD VDLNKVEPWD 60 LPRKAKMGGR EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIYRVK TLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR LEGKYSLYNL PKTAKNEWVI SRIFQKTSGG KKTHISGLPM 180 MNSYGDDDES QPQNLPPLMD YSSSAHDDQT RRIATNTSHV TCFSDPMEDD KKPQETMLDT 240 FNKPSDLFST HFSPNLENLQ YTDPALMEDQ SILRFLLQNN GMNMKRYSKA EYSAETGIST 300 DISSNHEMGQ ISYEDPINSA GGPVDLDCLW NYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-127	NAC family protein