PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058193.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 762aa MW: 87775.2 Da PI: 8.9496

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.3	3.7e-11	48	115	2	72
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 fY +YAk+vGFs+ ++++ ++ge ++ Cs+ g+r+++++ + +++ +t++gCka+ +++ ++ XP_028058193.1 48 FYATYAKHVGFSIAHRAQYFG-DDGELKNFAIECSRAGERKKKSEV--NPLKPSLSTKIGCKARRRLEIND 115 9*************99997.9999**********998766..999**********98887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 762 aa Download sequence
MEVDSNGGDN PLVNEGEQVE SDFRPPRKQV EEPKKGMCFS SREEVYTFYA TYAKHVGFSI 60 AHRAQYFGDD GELKNFAIEC SRAGERKKKS EVNPLKPSLS TKIGCKARRR LEINDQAGIG 120 VSRNYHSMVV ETGGYESLTF DERDARNYTN RARRLRLGEG DAESLQSYFI KMQAHSEKFF 180 YARHRWCLWH VMKKIPEKLK GYAQYEPMKL AMQNAIYDCL TRDEFEEKWE EMLTKFNLYD 240 NEWLGVLYHE RHRWVPVLSV NHSSPSTIAF CGGEKKEIRS EPFEAMFVHK NWLQSKGTGY 300 STKEWDIYRR LEINDEAGIG VSRNYHSMVV EAGGYESLTF DERDARNYIN RARRLRLGEG 360 DAESLPSYFI KMQAHSEKFF YAQHRWCLWH VMKKIPEKLK GYAQYEPMKL AMQNAIYDCL 420 TRDEFEEKWE EMLTKFNLYD NEWLGVLYHE RHRWVPQAYT NAKFKEVQGE LKRLVYCQAL 480 IVKEEGAICT YNVQEAMVVC DKMKHVDFVV YFNSIECEVQ CMCRLFQFRG IMCAHSLAVL 540 VRRCINEVPS KYILPRWRKD LVREYTYIKT TYTGFGDDFN TSCYERMNKK LIAIIQLAGN 600 SEGKIKIINC ALDEMKDRVM HDKSGDGSNL APSTNRITSS TKSPIATGCT SGASTRKVVS 660 PLVVRRRGRP VTKRKVAKVD QIVNRFKITA KKQTKAKVVN AIGGTSLIPS NFVSGTPRSL 720 IHGPTQFLGS GSLTPSGSNA CIPGMNDGHC TARMNDGDCR NV

Sequence ? help Back to Top

Protein Sequence Length: 762 aa Download sequence

MEVDSNGGDN PLVNEGEQVE SDFRPPRKQV EEPKKGMCFS SREEVYTFYA TYAKHVGFSI  60
AHRAQYFGDD GELKNFAIEC SRAGERKKKS EVNPLKPSLS TKIGCKARRR LEINDQAGIG  120
VSRNYHSMVV ETGGYESLTF DERDARNYTN RARRLRLGEG DAESLQSYFI KMQAHSEKFF  180
YARHRWCLWH VMKKIPEKLK GYAQYEPMKL AMQNAIYDCL TRDEFEEKWE EMLTKFNLYD  240
NEWLGVLYHE RHRWVPVLSV NHSSPSTIAF CGGEKKEIRS EPFEAMFVHK NWLQSKGTGY  300
STKEWDIYRR LEINDEAGIG VSRNYHSMVV EAGGYESLTF DERDARNYIN RARRLRLGEG  360
DAESLPSYFI KMQAHSEKFF YAQHRWCLWH VMKKIPEKLK GYAQYEPMKL AMQNAIYDCL  420
TRDEFEEKWE EMLTKFNLYD NEWLGVLYHE RHRWVPQAYT NAKFKEVQGE LKRLVYCQAL  480
IVKEEGAICT YNVQEAMVVC DKMKHVDFVV YFNSIECEVQ CMCRLFQFRG IMCAHSLAVL  540
VRRCINEVPS KYILPRWRKD LVREYTYIKT TYTGFGDDFN TSCYERMNKK LIAIIQLAGN  600
SEGKIKIINC ALDEMKDRVM HDKSGDGSNL APSTNRITSS TKSPIATGCT SGASTRKVVS  660
PLVVRRRGRP VTKRKVAKVD QIVNRFKITA KKQTKAKVVN AIGGTSLIPS NFVSGTPRSL  720
IHGPTQFLGS GSLTPSGSNA CIPGMNDGHC TARMNDGDCR NV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	669	679	RPVTKRKVAKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	9e-16	FAR1 family protein