PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058146.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 360aa    MW: 38855.8 Da    PI: 5.2925
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13125176155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  XP_028058146.1 125 QKVSHITVERNRRKQMNEHLSILRSLMPCF---YVKRGDQASIIGGVVDYINELQ 176
                     6899*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDGCGSSGGG GGGDSFSDFF EESEFGKTHL AGAASPEDIF SILESLEGGG VAESAPIELP  60
EQTGLGWKDG GEEMGTMRLV SQKSTSSSAL IESETEIEAS SPKSKRQKLA NATASSEEAN  120
PDGQQKVSHI TVERNRRKQM NEHLSILRSL MPCFYVKRGD QASIIGGVVD YINELQQVLQ  180
SLEAKKQRKL YSEVLSPRLV SSPRPSPLSP RKPPLSPRLN LPISPRTPQP TSPYKPRLQQ  240
QGYLSPTSMP TSLDPSPSSC SCTSSINDTV NELFANSKSS IADVEVKFSG PNVLLKTVSS  300
RIPGQAMKII SALENLSLEI LHLSITTIDE NMLNSFTIKI GIECKLSAEE LAHQIQQTFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-100bHLH family protein