PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028057848.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 237aa MW: 27292.9 Da PI: 4.2113 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 78.4 | 1.3e-24 | 100 | 227 | 3 | 142 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +l+ + ea+++g+ el + +++r+se +sp g m +l y+ + ++ +++s ++ aa+ +f++++P+ kf+h++ XP_028057848.1 100 HLIKAYREAIDEGQIELSEVIMKRISEKVSPVGGVMDQLLYYLFQPVDKQADY----------LRQES---DKNFRAAFMTFYQIFPYGKFAHFA 181 666677799*********************************99988887776..........33333...4556678889************** PP GRAS 98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppsl 142 aN+aIl+a+ ++ e +H+iDfd+++G+QWp++++a+ ++++ +l XP_028057848.1 182 ANRAILQAMPHDvELIHVIDFDMGEGIQWPSMIEAIGWQQRKEIRL 227 *********9998999*******************98766655555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDVDMDDDNF DFCPPFITTE DYSFDNSKIS TFPIPTTLLD KFSDPQVHVK DSDIALPEDG 60 FSISVEDFDI EVLSNSLKQS EESLQLTLPT ENMELNNAIH LIKAYREAID EGQIELSEVI 120 MKRISEKVSP VGGVMDQLLY YLFQPVDKQA DYLRQESDKN FRAAFMTFYQ IFPYGKFAHF 180 AANRAILQAM PHDVELIHVI DFDMGEGIQW PSMIEAIGWQ QRKEIRLRPH IEALSLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 1e-17 | GRAS family protein |