PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057367.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 773aa MW: 88346.1 Da PI: 8.4067

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	3.8e-21	52	126	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn YA ++GF++r+ + ++s+ +g +++r+fvCskeg++++ +rtgC a ++v+k+++gkw+++++++eHnHel XP_028057367.1 52 EFYNLYAAQAGFRIRIGQLYRSRVDGAVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKSDSGKWVLANIKKEHNHEL 126 6*************************************987..............589*************************98 PP
2	FAR1	66	9.7e-21	206	281	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY +YA +GF+vr+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++++g+w+v++l++eHnH+l XP_028057367.1 206 KFYYAYAAGTGFKVRIGQLFRSKHDGSITSRRFVCSKEGHQHP--------------SRVGCGAFMRIQRQESGRWVVDRLQKEHNHDLD 281 6************************************9998..............4899************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MNREELGNVM NVRVKPAGGF VVKNNGHRED EGESKLEPHV GLEFDSAEEA QEFYNLYAAQ 60 AGFRIRIGQL YRSRVDGAVI SRRFVCSKEG FQTNSRTGCP AFIRVQKSDS GKWVLANIKK 120 EHNHELGLPG EIRPPHIQRK VLPAPKSPIV VSSRTGIRSL EEEDGHPSPS GVIDVKRLKR 180 EETEGIPHKV EPYKGLEFGS ANEAYKFYYA YAAGTGFKVR IGQLFRSKHD GSITSRRFVC 240 SKEGHQHPSR VGCGAFMRIQ RQESGRWVVD RLQKEHNHDL DSPMDASRLI SAAPKGFRDE 300 VSSGLENLDL VETNGGINLV KRGRQSNVGS DWYPVLLDYF QSRQAEDTGF FYAVEVDDGK 360 CMSLFWADGR SRFSCSQFGD AIVFDTAYRS SSYLVPFASF IGINHHRQPM LLGCALIADE 420 SEESFTWVFQ TWLRAMSRRC PLSIIADQDK AIQHSIAQVF PGTHHRFSTW QIKAKEQQYL 480 GALLSINTEF KYEYETCICQ SQAPSEFDSA WNVLLNKYDL KENAWLKEMY RTRKSWVPLY 540 IRGTFFAGIP MDGSMKSFFG TFLSAQTPLN EFVLRYEKAL EQRREEEKKE DFNSFNMQSV 600 LHTKDPIEEQ GRRLYTITMF KAFQKELLEC YSYVGIKINV EGAISRYLVQ TCGNGEARNT 660 VAFNASNLNV SCSCKMFEFE GVLCRHALKV FQIMNIRELP SRYILHRWTK SAKYGILRDV 720 DSGGGSQDFR PLMLWSLREE ARNFIESGAA SLERYKLAFE IMQEGRRNLC WPN

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MNREELGNVM NVRVKPAGGF VVKNNGHRED EGESKLEPHV GLEFDSAEEA QEFYNLYAAQ  60
AGFRIRIGQL YRSRVDGAVI SRRFVCSKEG FQTNSRTGCP AFIRVQKSDS GKWVLANIKK  120
EHNHELGLPG EIRPPHIQRK VLPAPKSPIV VSSRTGIRSL EEEDGHPSPS GVIDVKRLKR  180
EETEGIPHKV EPYKGLEFGS ANEAYKFYYA YAAGTGFKVR IGQLFRSKHD GSITSRRFVC  240
SKEGHQHPSR VGCGAFMRIQ RQESGRWVVD RLQKEHNHDL DSPMDASRLI SAAPKGFRDE  300
VSSGLENLDL VETNGGINLV KRGRQSNVGS DWYPVLLDYF QSRQAEDTGF FYAVEVDDGK  360
CMSLFWADGR SRFSCSQFGD AIVFDTAYRS SSYLVPFASF IGINHHRQPM LLGCALIADE  420
SEESFTWVFQ TWLRAMSRRC PLSIIADQDK AIQHSIAQVF PGTHHRFSTW QIKAKEQQYL  480
GALLSINTEF KYEYETCICQ SQAPSEFDSA WNVLLNKYDL KENAWLKEMY RTRKSWVPLY  540
IRGTFFAGIP MDGSMKSFFG TFLSAQTPLN EFVLRYEKAL EQRREEEKKE DFNSFNMQSV  600
LHTKDPIEEQ GRRLYTITMF KAFQKELLEC YSYVGIKINV EGAISRYLVQ TCGNGEARNT  660
VAFNASNLNV SCSCKMFEFE GVLCRHALKV FQIMNIRELP SRYILHRWTK SAKYGILRDV  720
DSGGGSQDFR PLMLWSLREE ARNFIESGAA SLERYKLAFE IMQEGRRNLC WPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein