PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057344.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 520aa    MW: 59522.2 Da    PI: 4.4419
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS123.13.3e-381455192374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     v+l+ +  ea+++++ el++ +++ + e +sp g+ ++Rl  y+ +   ++              +++   +s++  aa+k+f++++P+ kf+h+
  XP_028057344.1 145 VHLVQAYGEAMEKDQIELVEVIMKSIGEKVSPVGEIVERLLYYLFQPSDKQSDY----------LKQE---SSKNFHAAFKAFYQIFPYGKFAHF 226
                     778888899*********************************987754333222..........2233...367888999*************** PP

            GRAS  97 taNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvak 184
                     +aN aIlea+  + e +Hi+Dfdi++G+QW + ++a+ +++    ++R+T ++  + +      s  +  et++rL + A+ +g++++ + +   
  XP_028057344.1 227 AANLAILEAIPPDvEIIHIVDFDIGEGTQWSSVIEAIGCQQ---REIRLTSIKWTKGDsnhdhtSGWRFDETKRRLLDHASYFGLTLKVEEM--- 315
                     ***********998999*********************865...4577777766443355556788899********************997... PP

            GRAS 185 rledleleeLrvkp....gEalaVnlvlqlhrlldesvsleserdevLklvksl....sPk.......vvvvveqe.adh..nsesFlerfleal 261
                     +l++le e+ ++k+    +E  a n+++ l ++   +v ++ +  e+Lk+ k++     P+       ++++ + +  +    ++sF   +   +
  XP_028057344.1 316 ELHNLESEMKNMKKrggrREWWAFNCMVGLPHMG--RVRSRRQVMEFLKVAKEVlsiqTPNcnsstkgIMTFGDADgWEIlkKASSFGSFLDGYV 408
                     6666666666666666889**************9..55555567889998887633342323333445899999985333535667777777789 PP

            GRAS 262 eyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.e 353
                      +y al++s+e+++p +  ++ri +E  ++++ ++++   +  +  er+e l   ++  +  G+   ++s++  ++ak ++r+     g  ve +
  XP_028057344.1 409 VHYQALLESMESTFPIQFgDARIALECLFVAPFVSSLSWIQRWH--EREE-LCDFQK--SYNGLVGWRVSKESLMEAKEMVREGVsLYGVVVEgD 498
                     9***************9978888888887777666665555554..3333.444443..678*******************99776889999966 PP

            GRAS 354 esgslvlgWkdrpLvsvSaWr 374
                     ++++++l W++ pLv vS+Wr
  XP_028057344.1 499 NNNEMILEWRGVPLVRVSFWR 519
                     689999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MMQSELLQLS WPSFTNLNSS FDEDKAYILD NMDAHMGHSD FSIFSDEFID FPVHVDELDF  60
MLPKDDFSSD FEEFENTFSS GEIGEMATSL ESEETPFQLP FGGEDQWSLS QSSNSSVTSM  120
DVALSQLSLI LPTDDMEIDN SLGLVHLVQA YGEAMEKDQI ELVEVIMKSI GEKVSPVGEI  180
VERLLYYLFQ PSDKQSDYLK QESSKNFHAA FKAFYQIFPY GKFAHFAANL AILEAIPPDV  240
EIIHIVDFDI GEGTQWSSVI EAIGCQQREI RLTSIKWTKG DSNHDHTSGW RFDETKRRLL  300
DHASYFGLTL KVEEMELHNL ESEMKNMKKR GGRREWWAFN CMVGLPHMGR VRSRRQVMEF  360
LKVAKEVLSI QTPNCNSSTK GIMTFGDADG WEILKKASSF GSFLDGYVVH YQALLESMES  420
TFPIQFGDAR IALECLFVAP FVSSLSWIQR WHEREELCDF QKSYNGLVGW RVSKESLMEA  480
KEMVREGVSL YGVVVEGDNN NEMILEWRGV PLVRVSFWRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-19GRAS family protein