PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028057126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 175aa MW: 19595 Da PI: 9.9747 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00077 | 50 | 72 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F ++ L H++ H XP_028057126.1 50 FSCNFCKRKFYSSQALGGHQNAH 72 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MKISENSDEG RTLNVNQGQW LNLSLGRNPD TTTPLGESSS QSRPISTKVF SCNFCKRKFY 60 SSQALGGHQN AHKRERGAAR GYPSQRMMTI MSFPSYTSMD RSLGVRPHSL VHKPSRDGTT 120 IVGRFNDTNT GFGIAWAPHI VEESMDLMWP GSFHLNRQPP EQPSDTLTVD LNLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24625.1 | 7e-21 | C2H2 family protein |