PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056900.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 407aa MW: 46420.4 Da PI: 4.742

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.6	4.8e-34	15	106	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d+ ++++sws++++sfvv+++ efa+++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll++ XP_028056900.1 15 FLVKTYEMVDDHCSDSVVSWSQSNKSFVVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANEDFIRGQPHLLKN 100 9*************************************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_028056900.1 101 IHRRKP 106 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MMDETQCSSN VLPPFLVKTY EMVDDHCSDS VVSWSQSNKS FVVWNPPEFA RDLLPRFFKH 60 NNFSSFIRQL NTYGFRKIDP EQWEFANEDF IRGQPHLLKN IHRRKPVHSH SLQNQQGQGT 120 SSSSLTESER QQYEDKIERL KCDKESRLLD LESQKQEQQG IDLQKCVLTE HFQRVEQRQK 180 TMLSSLAQTL QKPGLALDLL PRSEIHDRKR RLPPNNYLCD EVGIEDNPRM GTSQIMTREN 240 SSASSVSVLN KESLEQLESS LMFWENIIHD VGQAYEQQNS SVELDESTSC ADSPTISYTQ 300 LNIDIGSKTS GLDMNSEPAG PLAPEVDDLE EHVARPVATV PTGVNDVFWE QFLTENPGSS 360 DAAEIHSERK GLDGRNNESN YGKFWLDARS VNYLAEHLGQ LTPAERT

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MMDETQCSSN VLPPFLVKTY EMVDDHCSDS VVSWSQSNKS FVVWNPPEFA RDLLPRFFKH  60
NNFSSFIRQL NTYGFRKIDP EQWEFANEDF IRGQPHLLKN IHRRKPVHSH SLQNQQGQGT  120
SSSSLTESER QQYEDKIERL KCDKESRLLD LESQKQEQQG IDLQKCVLTE HFQRVEQRQK  180
TMLSSLAQTL QKPGLALDLL PRSEIHDRKR RLPPNNYLCD EVGIEDNPRM GTSQIMTREN  240
SSASSVSVLN KESLEQLESS LMFWENIIHD VGQAYEQQNS SVELDESTSC ADSPTISYTQ  300
LNIDIGSKTS GLDMNSEPAG PLAPEVDDLE EHVARPVATV PTGVNDVFWE QFLTENPGSS  360
DAAEIHSERK GLDGRNNESN YGKFWLDARS VNYLAEHLGQ LTPAERT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	212	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-110	HSF family protein