PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055663.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 312aa    MW: 35936.3 Da    PI: 9.4794
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.2e-1816103196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv       +s+rl++p +f+++++g        +l+d+ g+ W v++  +   +++++++GW++F++++ L  gDfv+F+++g+s f    k
  XP_028055663.1  16 FFKVY--LPDQNSQRLRVPPDFVKHFNGT--IRNNAILKDLGGKIWHVEM--EEAENGIYFKNGWQRFANDHSLVFGDFVLFTYKGNSLF--DAK 102
                     67777..56677788********877766..4457***************..*********************************98877..444 PP

                     E CS
              B3  96 v 96 
                     v
  XP_028055663.1 103 V 103
                     4 PP
2B3598.7e-19216310199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffk+ +++ + + g + +p +f++++++k +es+ l     s +sW vk+   +++++ + +++GW+ F ++n Lk gD+++F+l++r++f l+v
  XP_028055663.1 216 FFKIAMKPAYITGGVMNIPSRFLKSYMEKDRESVILL---VSDQSWPVKV--IRSRKSvCNFSGGWRVFRRENTLKPGDVCIFELVDRNDFVLKV 305
                     89999*********************87766763333...467*******..4444444889********************************* PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++fr+
  XP_028055663.1 306 SIFRS 310
                     **995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAERDSDRKA SYFDEFFKVY LPDQNSQRLR VPPDFVKHFN GTIRNNAILK DLGGKIWHVE  60
MEEAENGIYF KNGWQRFAND HSLVFGDFVL FTYKGNSLFD AKVFGKNGCL KEEAFANKCM  120
NEEASNADKI AVPVKIKEES EEEHTCFVPI HNCKWKYSEI GRKRCKISLG KSKRLVREAS  180
SDGITKRTLH PIVPRAIQGD EEALEVASKF VSKFPFFKIA MKPAYITGGV MNIPSRFLKS  240
YMEKDRESVI LLVSDQSWPV KVIRSRKSVC NFSGGWRVFR RENTLKPGDV CIFELVDRND  300
FVLKVSIFRS LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-24B3 family protein