PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055660.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 343aa MW: 39657.2 Da PI: 10.0473

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.7	1e-18	16	106	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +s++l++p f+++++g + +l+d g++W v++ + +++++++GW++F++++ L+ g f+vFk++g+s f vk XP_028055660.1 16 FFKIY--LPDQSSQCLRVPPAFVKKINGT--IPNNAKLKDHGGNVWHVEV--EEDENGVYFKNGWQRFASDHSLEFGNFLVFKYTGNSLF--DVK 102 56666..34445555*********777..5667***********..********************************9999..999 PP EE-S CS B3 96 vfrk 99 +f k XP_028055660.1 103 IFGK 106 9876 PP
2	B3	45.2	1.6e-14	255	330	11	89
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ rl+lp++ + ++g+k e+ +++l+d++g+ W vk+ ++ +gr ++t+GW +F k+ L +D ++F++ r++ XP_028055660.1 255 SARYRLTLPRQWLVKNGIKM-EP-EMVLRDQNGKLWPVKV-TSRLDGRLTFTNGWADFWKEYSLGLNDQCLFEFAFRRG 330 56779*********8774.44.9***********.5788889***********************764433 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MTKRHSSRKV SFFDEFFKIY LPDQSSQCLR VPPAFVKKIN GTIPNNAKLK DHGGNVWHVE 60 VEEDENGVYF KNGWQRFASD HSLEFGNFLV FKYTGNSLFD VKIFGKNGCM KEEALANKHM 120 NEETVEKTAI SVKIEQESEE EQIRSKNIQN CKLKYSEIGM KRSVKSEGCD EVGRRKSQRI 180 ASKTIKQHGG FDASNLHFIP SVHPTAMKRS VKSEEVSRHK SQSTPSKIIE QHTAFDASEF 240 VVPTNPHFIA SLYPSARYRL TLPRQWLVKN GIKMEPEMVL RDQNGKLWPV KVTSRLDGRL 300 TFTNGWADFW KEYSLGLNDQ CLFEFAFRRG RRLSREIQVQ ILR

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MTKRHSSRKV SFFDEFFKIY LPDQSSQCLR VPPAFVKKIN GTIPNNAKLK DHGGNVWHVE  60
VEEDENGVYF KNGWQRFASD HSLEFGNFLV FKYTGNSLFD VKIFGKNGCM KEEALANKHM  120
NEETVEKTAI SVKIEQESEE EQIRSKNIQN CKLKYSEIGM KRSVKSEGCD EVGRRKSQRI  180
ASKTIKQHGG FDASNLHFIP SVHPTAMKRS VKSEEVSRHK SQSTPSKIIE QHTAFDASEF  240
VVPTNPHFIA SLYPSARYRL TLPRQWLVKN GIKMEPEMVL RDQNGKLWPV KVTSRLDGRL  300
TFTNGWADFW KEYSLGLNDQ CLFEFAFRRG RRLSREIQVQ ILR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	7e-40	B3 family protein