PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055659.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 348aa MW: 40130.7 Da PI: 9.9729

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.7	1.1e-18	16	106	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +s++l++p f+++++g + +l+d g++W v++ + +++++++GW++F++++ L+ g f+vFk++g+s f vk XP_028055659.1 16 FFKIY--LPDQSSQCLRVPPAFVKKINGT--IPNNAKLKDHGGNVWHVEV--EEDENGVYFKNGWQRFASDHSLEFGNFLVFKYTGNSLF--DVK 102 56666..34445555*********777..5667***********..********************************9999..999 PP EE-S CS B3 96 vfrk 99 +f k XP_028055659.1 103 IFGK 106 9876 PP
2	B3	45.2	1.7e-14	260	335	11	89
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ rl+lp++ + ++g+k e+ +++l+d++g+ W vk+ ++ +gr ++t+GW +F k+ L +D ++F++ r++ XP_028055659.1 260 SARYRLTLPRQWLVKNGIKM-EP-EMVLRDQNGKLWPVKV-TSRLDGRLTFTNGWADFWKEYSLGLNDQCLFEFAFRRG 335 56779*********8774.44.9***********.5788889***********************764433 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MTKRHSSRKV SFFDEFFKIY LPDQSSQCLR VPPAFVKKIN GTIPNNAKLK DHGGNVWHVE 60 VEEDENGVYF KNGWQRFASD HSLEFGNFLV FKYTGNSLFD VKIFGKNGCM KEEALANKHM 120 NEETVEKTAI SVKIEQESEE EQIRSKNIQN CKLKYSEIGM KRSVKSEGCD EVGRRKSQRI 180 ASKTIKQHGG FDASNLHFIP SVHPTAMKRS VKSEVTGSEE VSRHKSQSTP SKIIEQHTAF 240 DASEFVVPTN PHFIASLYPS ARYRLTLPRQ WLVKNGIKME PEMVLRDQNG KLWPVKVTSR 300 LDGRLTFTNG WADFWKEYSL GLNDQCLFEF AFRRGRRLSR EIQVQILR

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MTKRHSSRKV SFFDEFFKIY LPDQSSQCLR VPPAFVKKIN GTIPNNAKLK DHGGNVWHVE  60
VEEDENGVYF KNGWQRFASD HSLEFGNFLV FKYTGNSLFD VKIFGKNGCM KEEALANKHM  120
NEETVEKTAI SVKIEQESEE EQIRSKNIQN CKLKYSEIGM KRSVKSEGCD EVGRRKSQRI  180
ASKTIKQHGG FDASNLHFIP SVHPTAMKRS VKSEVTGSEE VSRHKSQSTP SKIIEQHTAF  240
DASEFVVPTN PHFIASLYPS ARYRLTLPRQ WLVKNGIKME PEMVLRDQNG KLWPVKVTSR  300
LDGRLTFTNG WADFWKEYSL GLNDQCLFEF AFRRGRRLSR EIQVQILR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	6e-40	B3 family protein