PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028055658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 348aa MW: 40130.7 Da PI: 9.9729 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.7 | 1.1e-18 | 16 | 106 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +s++l++p f+++++g + +l+d g++W v++ + +++++++GW++F++++ L+ g f+vFk++g+s f vk XP_028055658.1 16 FFKIY--LPDQSSQCLRVPPAFVKKINGT--IPNNAKLKDHGGNVWHVEV--EEDENGVYFKNGWQRFASDHSLEFGNFLVFKYTGNSLF--DVK 102 56666..34445555***********777..5667***************..**********************************9999..999 PP EE-S CS B3 96 vfrk 99 +f k XP_028055658.1 103 IFGK 106 9876 PP | |||||||
2 | B3 | 45.2 | 1.7e-14 | 260 | 335 | 11 | 89 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ rl+lp++ + ++g+k e+ +++l+d++g+ W vk+ ++ +gr ++t+GW +F k+ L +D ++F++ r++ XP_028055658.1 260 SARYRLTLPRQWLVKNGIKM-EP-EMVLRDQNGKLWPVKV-TSRLDGRLTFTNGWADFWKEYSLGLNDQCLFEFAFRRG 335 56779***********8774.44.9***************.5788889*************************764433 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 348 aa Download sequence |
MTKRHSSRKV SFFDEFFKIY LPDQSSQCLR VPPAFVKKIN GTIPNNAKLK DHGGNVWHVE 60 VEEDENGVYF KNGWQRFASD HSLEFGNFLV FKYTGNSLFD VKIFGKNGCM KEEALANKHM 120 NEETVEKTAI SVKIEQESEE EQIRSKNIQN CKLKYSEIGM KRSVKSEGCD EVGRRKSQRI 180 ASKTIKQHGG FDASNLHFIP SVHPTAMKRS VKSEVTGSEE VSRHKSQSTP SKIIEQHTAF 240 DASEFVVPTN PHFIASLYPS ARYRLTLPRQ WLVKNGIKME PEMVLRDQNG KLWPVKVTSR 300 LDGRLTFTNG WADFWKEYSL GLNDQCLFEF AFRRGRRLSR EIQVQILR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 6e-40 | B3 family protein |