PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055456.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 200aa MW: 22713.7 Da PI: 8.4957

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++ +G g+W++ ++ g+ R++k+c++rw +yl XP_028055456.1 14 KGAWTKEEDERLISYIGAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	55.8	1.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T+eEdel+++++ +lG++ W++Ia ++ gRt++++k++w+++l XP_028055456.1 67 RGHFTPEEDELIINLHSLLGNK-WSLIAGKLA-GRTDNEIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDERLISYIG AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPNLKRGHF TPEEDELIIN LHSLLGNKWS LIAGKLAGRT DNEIKNYWNT HLRRKLLSRG 120 IDPVTHRPLN EPTTTTTSTS NSTTLIFSAV EDKKEGEENY EVIIGCQEQR NTSQEQCPPQ 180 LNLELRINLP SHHPPPQLPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	8e-88	MYB family protein