PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028054564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 428aa MW: 46408.4 Da PI: 6.6418 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 205 | 254 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_028054564.1 205 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 254 59*******.**********7.....337*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence |
MCLSKVANPG DTGEFVRFPA SETTDEGGPY YHQAQPQQEE EEQQQTTMFS GYSRPREESA 60 VVTALTHVVS GRRPGERGYR PELRGAATTS FVGSSGIYSP SNSASPGYSS SSSGSWVGQK 120 RGREEVSVTQ NQYSEQLHRV YRGFSDLRAS PHGDSSSITT AEEPTTNIVT TTSTTIPSTT 180 ITTTTQTPPT AVTASNEETR ERRIRYRGVR QRPWGKWAAE IRDPHKAARV WLGTFDTAEA 240 AARAYDEAAL RFRGNRAKLN FPENVRLLPP LQLSQTTQIP ISNSPTTHHF PATQSQPPPV 300 FFQPQQFQTS DTARDYWEYS QLLRSTGDFQ PTSSLEQMFY ASPSSASSLA GLNSQSLASS 360 SSPSFAADSS VTSSNSSYPP FFSDQQMGYF LPPGNRNQGG GGGGSSGGPV FEPPSWPGGS 420 GQYPPSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 3e-23 | ERF family protein |