PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028054076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 90aa MW: 10343.8 Da PI: 10.031 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 66.2 | 4.7e-21 | 2 | 83 | 7 | 83 |
.-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 7 psdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 sd++++g +++ +k+a+e+ ++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF XP_028054076.1 2 ASDTSTHGGFSVLRKHANEClpqldmtQS--TPTQDLVAKDLHGHEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVVGDAFVFL 83 799*******************9996444..44558***********************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
MASDTSTHGG FSVLRKHANE CLPQLDMTQS TPTQDLVAKD LHGHEWRFKH IFRGQPRRHL 60 LTTGWSTFVT SKRLVVGDAF VFLRYSILDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46530.2 | 4e-52 | ARF family protein |