PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053564.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 692aa MW: 75661.9 Da PI: 7.1985

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.6e-09	408	445	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt qV++WF N R + XP_028053564.1 408 FEHflHPYPKDSDKHMLAKQTGLTRGQVSNWFINARVR 445 554459******************************88 PP
2	BELL	113.3	1.3e-36	272	343	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqe q+kkakL+++l+eV++rY+qy++q+q+v+ssF ++ag gsak+Yt+lAl++iS++Fr Lkdai+ qi XP_028053564.1 272 QRQEAQMKKAKLVNMLDEVEQRYRQYHHQMQIVVSSFGQAAGTGSAKSYTALALQTISKQFRYLKDAITTQI 343 699*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MATYFHGSSE IQADGLQTLY LMNPNYVGYS DNSDTHQQQQ LQPHQPPSNL LLFNSPTKNA 60 LNSHAPPPQN HHLVGIPLPT VRSAYSDDPN RSLTHEIPTL HGMLPRFQYN SWGMADQTAM 120 ATSGSGGGLV DFASQLGFRR PVVPPTTTQQ GLSLSLSSQQ PTYRSLAGEH DISGQAPASG 180 GCEGQGSGGS YSSVSNGISG VILGSKYLTV AQQLLDEVVN VGKAIKIDDS EGTKEKAKMS 240 RESMTESEGH GGSSGGGGEA SSKGGAELTA AQRQEAQMKK AKLVNMLDEV EQRYRQYHHQ 300 MQIVVSSFGQ AAGTGSAKSY TALALQTISK QFRYLKDAIT TQIKAACKSL GEDEKTSEAT 360 GSRLKFVDHQ LRQQRALQQL GMVQQHNAWR PQRGLPERAV SVLRAWLFEH FLHPYPKDSD 420 KHMLAKQTGL TRGQVSNWFI NARVRLWKPM VEDMYLEEMK DQDPNGSENN LNQKEPNKDS 480 GSKFTTPQEN TTFQMDQTNS SLQSKQETAI NHTSSPTEIS NSAASTSPLE RSLQGGFTNF 540 QRSPKKPRSS DMLSSPSSIL SMDMDMKNSE TIGTSITSNS HGSGFGSYPI GDIGRFVDHE 600 QLATTRYHGN SVSLTLGLPH CENMSLSNAQ QNYISNHNIQ LGSRLNLGSV ETHYNGMNMN 660 TSQPSHSDIG FENVDIQNRK SFAAQLLRDF VA

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MATYFHGSSE IQADGLQTLY LMNPNYVGYS DNSDTHQQQQ LQPHQPPSNL LLFNSPTKNA  60
LNSHAPPPQN HHLVGIPLPT VRSAYSDDPN RSLTHEIPTL HGMLPRFQYN SWGMADQTAM  120
ATSGSGGGLV DFASQLGFRR PVVPPTTTQQ GLSLSLSSQQ PTYRSLAGEH DISGQAPASG  180
GCEGQGSGGS YSSVSNGISG VILGSKYLTV AQQLLDEVVN VGKAIKIDDS EGTKEKAKMS  240
RESMTESEGH GGSSGGGGEA SSKGGAELTA AQRQEAQMKK AKLVNMLDEV EQRYRQYHHQ  300
MQIVVSSFGQ AAGTGSAKSY TALALQTISK QFRYLKDAIT TQIKAACKSL GEDEKTSEAT  360
GSRLKFVDHQ LRQQRALQQL GMVQQHNAWR PQRGLPERAV SVLRAWLFEH FLHPYPKDSD  420
KHMLAKQTGL TRGQVSNWFI NARVRLWKPM VEDMYLEEMK DQDPNGSENN LNQKEPNKDS  480
GSKFTTPQEN TTFQMDQTNS SLQSKQETAI NHTSSPTEIS NSAASTSPLE RSLQGGFTNF  540
QRSPKKPRSS DMLSSPSSIL SMDMDMKNSE TIGTSITSNS HGSGFGSYPI GDIGRFVDHE  600
QLATTRYHGN SVSLTLGLPH CENMSLSNAQ QNYISNHNIQ LGSRLNLGSV ETHYNGMNMN  660
TSQPSHSDIG FENVDIQNRK SFAAQLLRDF VA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-110	TALE family protein