PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028053292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 250aa MW: 26859 Da PI: 6.9672 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.5 | 6e-35 | 92 | 175 | 5 | 82 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......eaesssssa 82 ++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tgt++ + + + ss ss+ XP_028053292.1 92 ASSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPTGPVstlagtLPLSSASSS 175 6789*********************************************************55555332222222111111111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAAQAHADDD QEIQETQQQH PQQLPTSTTT IELHVSLSRN QWVQRPDSKF SSQDQPTHHH 60 LAPPTTTTTT PAAASSGLEI PHQLVATRKV GASSSKDRHT KVNGRGRRVR MPALCAARIF 120 QLTRELGHRS DGETIEWLLR HAEPSIIAAT GTGTVPTGPV STLAGTLPLS SASSSSRVAG 180 VSGGGHVPAG MFAVAPPSCR LNLSQPSPTM VLDLSGNEYR HMPFTALLLQ PATDEAEERR 240 QEEVLGEEKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 1e-33 | TCP family protein |