PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028053208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 255aa MW: 27650.5 Da PI: 8.0873 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.5 | 2.4e-20 | 126 | 160 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ XP_028053208.1 126 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 160 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MNSCSSSSHG NMVGGPCTCG VFHTQSNSFS MLFPKDFDEQ EADMYSFTSS SSSSSSSPVD 60 CTLSLGTPST RSCESAEKRV HHHDRLIPSF CWDILQSKKH TASSPPTHNK ASRGSGGGDS 120 LLARRCANCD TTSTPLWRNG PRGPKSLCNA CGIRFKKEER RATATAAAAT ITTTTASGGA 180 ASAIMDSHQR MLNNSSWDQH HHQQSQKMPC FSPAIGNEFR FINADSDRDI DTSIPFLSWH 240 RNIADSPSLV HGFTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 1e-45 | GATA family protein |