PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028053156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 378aa MW: 43648.2 Da PI: 8.3722 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.7 | 4.7e-06 | 66 | 87 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg+sF + +L++H+ +H XP_028053156.1 66 TCEQCGTSFQKPAHLRQHMLSH 87 6*******************99 PP | |||||||
2 | zf-C2H2 | 19.6 | 2.5e-06 | 93 | 117 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H XP_028053156.1 93 FTCPldDCNSSYRRKDHLTRHLLQH 117 89*******************9887 PP | |||||||
3 | zf-C2H2 | 13 | 0.0003 | 122 | 147 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp +C+ +F + n+krH + H XP_028053156.1 122 FECPveNCNSRFAFQGNMKRHVKEfH 147 89********************9988 PP | |||||||
4 | zf-C2H2 | 18.2 | 6.9e-06 | 163 | 187 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cgk F+ s L++H +H XP_028053156.1 163 YICQeiGCGKEFKYASKLRKHEASH 187 89*******************9998 PP | |||||||
5 | zf-C2H2 | 13.6 | 0.0002 | 255 | 278 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C +Fs++snL++H + H XP_028053156.1 255 CNfkGCQHTFSTRSNLHQHEKAvH 278 88889**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MEKGGREREV PIFRDIRRYY CKYCGICRSK KSLITSHVLS HHQDKIEDND GVDGNGEKKE 60 VKSNNTCEQC GTSFQKPAHL RQHMLSHSIE RPFTCPLDDC NSSYRRKDHL TRHLLQHQGK 120 LFECPVENCN SRFAFQGNMK RHVKEFHEEE SSSSNGDNGP KQYICQEIGC GKEFKYASKL 180 RKHEASHVEL VTVETFCSEP GCMKNFTNLQ CLKAHLQSCH RHITCEVCGT KQLKKNIKRH 240 LRTHEAGCSS ERINCNFKGC QHTFSTRSNL HQHEKAVHLE LRRFACSITG CGMRFTFKHV 300 RDKHEKSGCH VYTYGDFEES DEQFRSIPRG GQKRKCPTIE TLTRKRVCPP SESDSIMNQG 360 PDYLSWLLST EAEDDGQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-140 | C2H2 family protein |