PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028051864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 172aa MW: 20093.5 Da PI: 7.2344 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.7 | 1.8e-13 | 28 | 87 | 1 | 48 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............t 48 +fYn+Y+ +vGFs rk++ +++k+++eit+rtfvC+ke +r +k++ t XP_028051864.1 28 DFYNTYGGNVGFSSRKAYANRNKHTKEITSRTFVCYKERSRGIDKRDplvknprqelhqT 87 6****************************************9999986655554444331 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 172 aa Download sequence |
MEENNIVDDC GWKPKVGMPF DFEQAAYDFY NTYGGNVGFS SRKAYANRNK HTKEITSRTF 60 VCYKERSRGI DKRDPLVKNP RQELHQTGPM SNKAPKTIFT DQHAAMANTN HRLCTWHLMQ 120 NAVKHVSSVF NDVGVKAVFS KFMHDIDDEE EFRMQWNQML DKYDAFDNHC LE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-10 | FAR1 family protein |