PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc326722.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 120aa MW: 13736.7 Da PI: 10.3163 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 4e-05 | 14 | 36 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k + +Lk H++ + Cse_sc326722.1_g010.1 14 HKCDTCSKAYAAEVDLKAHLKIC 36 79******************987 PP | |||||||
2 | zf-C2H2 | 11.5 | 0.00093 | 44 | 60 | 5 | 21 |
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg+ F+ k++L+ H+ Cse_sc326722.1_g010.1 44 SCGMKFKKKYDLNLHMD 60 6**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
KKHYLRKHVT EKNHKCDTCS KAYAAEVDLK AHLKICGKKK HKCSCGMKFK KKYDLNLHMD 60 HYCSARRLNG ATNHSSRNEM GNNSANVTRN NNTGSFMIGS TLSYPPTFNM ERNSDRITIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 4e-16 | C2H2 family protein |