PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc116514.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 224aa MW: 25171.2 Da PI: 9.4173 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.2 | 1.1e-11 | 82 | 173 | 7 | 98 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 + + + +++l+lp +f++ ++++e +++++++g++ ++ ++ r ks +y l+ GW F + n++ +gD +vFk++ ++++ + Cse_sc116514.1_g010.1 82 TISITHKHMLRLPPDFVALARIDTKE--NIIMKSLDGNESQMAVRPdkRFKSAQYNLSLGWVAFKQRNNISQGDECVFKYITSEDKMC 167 566778899*******9766766555..69999****99999996633445555***************************9888877 PP EEEEE- CS B3 93 vvkvfr 98 + k+++ Cse_sc116514.1_g010.1 168 LAKIIK 173 777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MISLDGSENQ MAIRKGKRHV ASTLYQLSEG WRAFMHSNNI SQGDKCVLKY ITSEDKMCLA 60 KIIKAPATKV DVNDGDPSFV VTISITHKHM LRLPPDFVAL ARIDTKENII MKSLDGNESQ 120 MAVRPDKRFK SAQYNLSLGW VAFKQRNNIS QGDECVFKYI TSEDKMCLAK IIKAPATKVD 180 VNDGDPSFVV TISITHKHML RLPPDFVALA RIDTKENIIM KSLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26680.1 | 1e-09 | B3 family protein |