PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc073208.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 421aa    MW: 48773.3 Da    PI: 4.7094
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc073208.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM934.9e-29231511128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 
                            l+pG+rF Ptd el+v+yLk+k+e+ k + +    ev+iy++ P +L +  ++++ e++wyf + +++k+++g+r+nr+tk  g+W+a
  Cse_sc073208.1_g010.1  23 LQPGYRFCPTDPELIVYYLKPKIETGKRHPNCRYYEVNIYDYSPDELTAkpEYRSCENKWYFLTWTEQKHPNGNRQNRQTKnGGTWRA 110
                            579*********************9997774569*************84356777889********************6664889*** PP

                    NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            + +  +v++  ++++vg + +Lv+ +   +k +kt W+m+ey+ 
  Cse_sc073208.1_g010.1 111 SQTCAAVKDDvTNRVVGSRLSLVYID---EKKRKTPWLMQEYTT 151
                            *******99888899**********4...44468********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MAVINQEIIR YNNQKEHDYV DTLQPGYRFC PTDPELIVYY LKPKIETGKR HPNCRYYEVN  60
IYDYSPDELT AKPEYRSCEN KWYFLTWTEQ KHPNGNRQNR QTKNGGTWRA SQTCAAVKDD  120
VTNRVVGSRL SLVYIDEKKR KTPWLMQEYT TKNPDIPKES RKHNTNQNKM TEWVLCKIYK  180
KVPKQNAKNN LADQEEAIVE QNHRLEEEPS PRRTDVQIVE PMQFVLTSNQ QSDLNNVHVG  240
SSQTFPTISM KTSPNSITMQ HIPMLCDSNL MQPPFECGSS TFGYYQNQSC PSSTERIRFS  300
SGASSSSSMV LPQEEDATGH VVQLDDMMTC PAPAVQMDTN LNPMTFSQTL TDDVFQQDFQ  360
NSYHDTPRLY EEPTMVPEAE YSSSNPDSVM ELENFLSFDP SERISIDDLM DPPMDEFDWN  420
M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-30NAC family protein