PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc065279.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 28787.2 Da PI: 4.5208 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.8 | 1.8e-20 | 60 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+p + r kr +lg+fg+a eAa+a+++a+++++g Cse_sc065279.1_g010.1 60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFGSAVEAARAYDEAARAMYG 110 579****999.**********8...3.35************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDNLAKKQKR KRTEGPKIVA ETIAKWVKIN KDAKTTRKAP AKGSTKGCMK GKGGPENSRC 60 SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FGSAVEAARA YDEAARAMYG PSARINLPNY 120 CPDASEVREA KSGLGTQNVC QASASEVDVT GIGNDDGYYQ GFPEDEMIDI DELLGLMDDQ 180 KGESINEAES SGHPMYDAWF ENKLDDFGFD FMQMGPEECN FTLEEFGLSL DPAEPVTTGP 240 EECGFTLEEF GLSLDPAEPV M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 3e-35 | ERF family protein |