PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc060237.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 949aa MW: 107797 Da PI: 5.3699

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc060237.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	25.4	2.8e-08	789	829	4	44
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 ++s ed+++++ +++k+AAk+Lgv+l++LKr+ ++G++ W Cse_sc060237.1_g020.1 789 KLSREDIEQHYGKTMKKAAKDLGVSLSTLKRKHNKLGMSGW 829 7999****************************999999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 949 aa Download sequence
MQGSVYHELD PFLCNAFQEC NLDSFVMIPI CCPSQTSSSY DCIGVIECSS PFTNCTDIFN 60 EMNMKIKEVG LGVYNLQDRI PYKTISGLKL VRRQIQEALK IVCQSHDITL AQVWIASLDE 120 NHVHFSSSWE EALTRRSLGL KLTGYNSEHY YATNYRFFQY YHDACDLIPL QPGQELVMKT 180 LQDYEPRFCK NISQLVTYKL MGLGILAAVD RIRSLTICMR SIHTGDFNYV FEFLWNHNSF 240 YPILLEELLL KIKSCLPSFK FASGTEIGDK LYVIEVDNSI GKEINRKFDI SQLKRLSPIP 300 EALKEGNKQV AVDYIAPLAT KCKPAPVLTP QQVIEQQLGT STTENFHEAA ENIFDNGNPM 360 ADRDDERLSE FLETLPTCIL HKKPETEGAL WVFCSEDEGS QNNSSSDVLG TWMIHDKIKS 420 AFSKVGNSGE LIVQFWAPVT SGNRLVLSTS GQPFAVSDFV EAVVEYRGRC MGYKCNIDMN 480 NNNKVIKDEI EQHGDRLPMT MISGPPTNAF LNRLPEAVLD TKNHHEGSLM RYASDCGLWT 540 SYTLPIGCPQ YYSSCIGVVE CSSISSINLE IVNTMNRALE QEGLNVFNVQ DRIPYNTING 600 LTLVRDEIQV ALKSVCESHK IGVAQVWISY EDENHVPFSF SSEDSQTTRR LALKLTGYNS 660 VDEDSTLSNW RFKEYYDACD MVPLKKGEEL VEKTLQDYQP RFCENISQLG TDTLMGWVST 720 DDFASGAELG DQLHVIDVDN STKSETKFFK IFKEKRLSPI PEEIDKGKKA MVVNYNARSK 780 EKHDTTEIKL SREDIEQHYG KTMKKAAKDL GVSLSTLKRK HNKLGMSGWQ GPDLPQSKVY 840 NSNKKQRNES YTHEKDNGVI QDPSSVKRNE NSVIKAEYAD DIIKIRLGNS EATFLTVENE 900 IGKVFKLKHG NFKIKYLDED EEWILMTSDQ DLSECIQNSR RLRVLLHNQ

Sequence ? help Back to Top

Protein Sequence Length: 949 aa Download sequence

MQGSVYHELD PFLCNAFQEC NLDSFVMIPI CCPSQTSSSY DCIGVIECSS PFTNCTDIFN  60
EMNMKIKEVG LGVYNLQDRI PYKTISGLKL VRRQIQEALK IVCQSHDITL AQVWIASLDE  120
NHVHFSSSWE EALTRRSLGL KLTGYNSEHY YATNYRFFQY YHDACDLIPL QPGQELVMKT  180
LQDYEPRFCK NISQLVTYKL MGLGILAAVD RIRSLTICMR SIHTGDFNYV FEFLWNHNSF  240
YPILLEELLL KIKSCLPSFK FASGTEIGDK LYVIEVDNSI GKEINRKFDI SQLKRLSPIP  300
EALKEGNKQV AVDYIAPLAT KCKPAPVLTP QQVIEQQLGT STTENFHEAA ENIFDNGNPM  360
ADRDDERLSE FLETLPTCIL HKKPETEGAL WVFCSEDEGS QNNSSSDVLG TWMIHDKIKS  420
AFSKVGNSGE LIVQFWAPVT SGNRLVLSTS GQPFAVSDFV EAVVEYRGRC MGYKCNIDMN  480
NNNKVIKDEI EQHGDRLPMT MISGPPTNAF LNRLPEAVLD TKNHHEGSLM RYASDCGLWT  540
SYTLPIGCPQ YYSSCIGVVE CSSISSINLE IVNTMNRALE QEGLNVFNVQ DRIPYNTING  600
LTLVRDEIQV ALKSVCESHK IGVAQVWISY EDENHVPFSF SSEDSQTTRR LALKLTGYNS  660
VDEDSTLSNW RFKEYYDACD MVPLKKGEEL VEKTLQDYQP RFCENISQLG TDTLMGWVST  720
DDFASGAELG DQLHVIDVDN STKSETKFFK IFKEKRLSPI PEEIDKGKKA MVVNYNARSK  780
EKHDTTEIKL SREDIEQHYG KTMKKAAKDL GVSLSTLKRK HNKLGMSGWQ GPDLPQSKVY  840
NSNKKQRNES YTHEKDNGVI QDPSSVKRNE NSVIKAEYAD DIIKIRLGNS EATFLTVENE  900
IGKVFKLKHG NFKIKYLDED EEWILMTSDQ DLSECIQNSR RLRVLLHNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38340.1	3e-15	Nin-like family protein