PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc054973.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 462aa MW: 51996.4 Da PI: 8.2954

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc054973.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.5e-12	287	332	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f +Lr+++P K++K + Le +v YI++L Cse_sc054973.1_g010.1 287 NHVEAERQRRENLNQSFYKLRSVVPYV-----SKMNKKSLLEDTVCYINEL 332 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MDDEFLILSP SSSSSIIHQN THNSYHKLQF LLQTQPNDPW AFAIFWKTTY NHGHGRPWTL 60 TWGDGYFLQN PNKPDFDNTD GTEWFYVVSL AGSFGFGDGS SPSNSFTTNS VIWLTGAHSL 120 ISFNCERAKE AYIHGLETLV YIPTTNGVVE MGSYHVINQT ESDLAHRAKS LFGASSSSLS 180 SFSSLSNNLV KQPNDYLISF GEMVSRLPQD EESKYIFDLG TTTFGQESKK LGKVGKKESK 240 SKKLGKVVGD TNNKRNEVSK TGSDHSDSDC ELVLKTREKR SQKKPLNHVE AERQRRENLN 300 QSFYKLRSVV PYVSKMNKKS LLEDTVCYIN ELKNKVEELE AQLRDMNYQP KLKKIKVKAP 360 DVTVDPNSQG ANIYKNGNGT KMNEPLKVEV RMAGDNATIR VQSGNWDWPS AKLMDALREM 420 EAKVHHASMS CINDVMLQDV VARVTGVTGD EVKYHLLARL NQ

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MDDEFLILSP SSSSSIIHQN THNSYHKLQF LLQTQPNDPW AFAIFWKTTY NHGHGRPWTL  60
TWGDGYFLQN PNKPDFDNTD GTEWFYVVSL AGSFGFGDGS SPSNSFTTNS VIWLTGAHSL  120
ISFNCERAKE AYIHGLETLV YIPTTNGVVE MGSYHVINQT ESDLAHRAKS LFGASSSSLS  180
SFSSLSNNLV KQPNDYLISF GEMVSRLPQD EESKYIFDLG TTTFGQESKK LGKVGKKESK  240
SKKLGKVVGD TNNKRNEVSK TGSDHSDSDC ELVLKTREKR SQKKPLNHVE AERQRRENLN  300
QSFYKLRSVV PYVSKMNKKS LLEDTVCYIN ELKNKVEELE AQLRDMNYQP KLKKIKVKAP  360
DVTVDPNSQG ANIYKNGNGT KMNEPLKVEV RMAGDNATIR VQSGNWDWPS AKLMDALREM  420
EAKVHHASMS CINDVMLQDV VARVTGVTGD EVKYHLLARL NQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-37	bHLH family protein