PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc053863.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 463aa MW: 50889.4 Da PI: 6.5871

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc053863.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.3e-17	44	88	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a +++G W++I +++g ++t+ q++s+ qky Cse_sc053863.1_g010.1 44 RERWTEEEHKKFIEALRLHGRA-WRRIEEHVG-TKTAVQIRSHAQKY 88 78****************88.*****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MVCESMAEDH SEGSVTNTVK NDQFTSTDDY SPKVRKPYTI TKQRERWTEE EHKKFIEALR 60 LHGRAWRRIE EHVGTKTAVQ IRSHAQKYFT KVDYCYILVV RESTSGDACE VKPIEIPPPR 120 PKRKPMHPYP RKLSAPIKTG GHHGRSTSPN SSESDQENQS PTSVLSAGGS NMFALGDSCS 180 PNTGSGSSPS SPVSSANGAK PHGSSNFEPE LLPDQENASS PPTIMESCIE EKESSPEVGS 240 TQSLKLFGKT VVVTETHRPS STNEVVDQSE GNFVNFVPQN LMPISSLPCG APLYYMQFLD 300 ENSGASSSVT PLWGLYGGVS YPVAQPCNPV VPIKESGSGM QNGGSLTGSN TSDTESSGLK 360 EEEKKPVIGS ERSAFTRQQN KGGNKEKKEK CVKGFVPYKR CIAQRENNPS GEEREEQRSD 420 DFPSLESYSN ILTEAQGIGV EIWIFRSNKH RRVEDYITNV ASR

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MVCESMAEDH SEGSVTNTVK NDQFTSTDDY SPKVRKPYTI TKQRERWTEE EHKKFIEALR  60
LHGRAWRRIE EHVGTKTAVQ IRSHAQKYFT KVDYCYILVV RESTSGDACE VKPIEIPPPR  120
PKRKPMHPYP RKLSAPIKTG GHHGRSTSPN SSESDQENQS PTSVLSAGGS NMFALGDSCS  180
PNTGSGSSPS SPVSSANGAK PHGSSNFEPE LLPDQENASS PPTIMESCIE EKESSPEVGS  240
TQSLKLFGKT VVVTETHRPS STNEVVDQSE GNFVNFVPQN LMPISSLPCG APLYYMQFLD  300
ENSGASSSVT PLWGLYGGVS YPVAQPCNPV VPIKESGSGM QNGGSLTGSN TSDTESSGLK  360
EEEKKPVIGS ERSAFTRQQN KGGNKEKKEK CVKGFVPYKR CIAQRENNPS GEEREEQRSD  420
DFPSLESYSN ILTEAQGIGV EIWIFRSNKH RRVEDYITNV ASR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	1e-49	MYB_related family protein