PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc052482.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 336aa MW: 37462.7 Da PI: 6.0413

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc052482.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.8	4e-27	145	206	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+++pr+YYrC+++ gC + k+v++ +++p++++itY+g+H+++ Cse_sc052482.1_g010.1 145 LDDGYSWRKYGQKDILGAKNPRGYYRCAYRqveGCLAVKQVQKVDKEPNIFDITYRGSHTCN 206 59*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MQKKGELTYS YYFLDVAKPN MDHKQIVDEL TQGKEFAKQL MIHLDNPLSS NEVQEILIHN 60 ILNSYDKSLS LLMAHGLSPV SHSSGGMGIT RLESQPPFTV SPHRADSGRG LENLDHKDLN 120 AKRNDNGITG XQVMVRGDMG FEEALDDGYS WRKYGQKDIL GAKNPRGYYR CAYRQVEGCL 180 AVKQVQKVDK EPNIFDITYR GSHTCNPGSH QESTSLSLPV STPRLETQQP PQQNQVVQSR 240 ETLLKFQKSP MAMLENLETH SFHFPSTSNK LFNLPPVDDI HDDPIACGSI SNAVNVESEL 300 HCVVSAAAIS PTSSQNVDVG FRFGELDFGN SFNIFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	4e-33	WRKY family protein