PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc049206.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21101.4 Da PI: 6.6279 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.2 | 5.5e-20 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrdp g ++r++lg+f+tae Aa+a++aa+ +++g Cse_sc049206.1_g010.1 20 HYRGVRKRP-WGRYAAEIRDP---GTKTRVWLGTFDTAEAAARAYDAAAINFRG 69 6********.**********8...325***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MVMKNQTTKP LTAPTVNEVH YRGVRKRPWG RYAAEIRDPG TKTRVWLGTF DTAEAAARAY 60 DAAAINFRGS KAKINFPPSF DGVTVANHNS HNSSTLESLT RESEVHAPVE LDLMKCVAVV 120 PHAQQPVMFF PYPIYQVEQQ CFDGGYGGGA HSESDSSSSG VDYNSPNDHT SYSNSKREIN 180 LDLNLAPPTV EV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 3e-28 | ERF family protein |