PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc047494.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 191aa MW: 21727.9 Da PI: 8.4741 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63 | 8.4e-20 | 82 | 176 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +rks++k+ r+g ++k+ +vC++eg +++ + + +k+ rt++ tgCka+++ +++ + k+++t+++ Cse_sc047494.1_g010.1 82 MYMRYASEAGFGIRKSTQKRL-RDGFVKKKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARVVFHMMPgSRKYRLTTFD 168 8***************99998.9999**************998888899887788888999999*************9********** PP FAR1 83 leHnHela 90 eHnHel Cse_sc047494.1_g010.1 169 VEHNHELD 176 ******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MEIFDLNEVP VGEDSIDLDV TISAVIFEVD DTSSGLKTPS SFIHHDFIDT PGGSVFWVPR 60 VAASVLPVLF SVYDSVEDCI SMYMRYASEA GFGIRKSTQK RLRDGFVKKK YLVCNREGCP 120 KKIRLNTLAP KKGDKQVRTS NFRITGCKAR VVFHMMPGSR KYRLTTFDVE HNHELDRVEY 180 KHLSKNCIDN L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 7e-09 | FAR1 family protein |