PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043981.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 350aa    MW: 40492.3 Da    PI: 9.7299
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043981.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.1e-05110133123
                            EEETTTTEEESSHHHHHHHHHH.T CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                            y C  Cg+ F +++ L +H +  H
  Cse_sc043981.1_g020.1 110 YICRVCGRKFYNNEKLINHFKQiH 133
                            89*****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MFGFIKLCTN DRRLPKVFRM IRHCHFNAGQ NIVAVFWDLD NKPPKSVSPF DAAIRLRKAA  60
ESFGDVRFKI AYANQRSFDY VPPKIKEHRR DRKKLDQLEN KGVVKPVDPY ICRVCGRKFY  120
NNEKLINHFK QIHEREHVKR VSQIESARGS QRVKLVGKYS MKMEKYSNAA RDILTPKVGY  180
GLGDELKRAG YWVSTVSNKP QAADVALKNH VVDMMDKRQM ECLILVSDDS DFVEVLKEAK  240
LRCLKTVVVG DCDEGALKRV SDASYSWQEV IMGKAKKEAV SVVGRWKDRD ILKRLEWTYN  300
YERERRLYGS FSEDDDSDVS NFVNREDDGN KMDGSRAWWK LESDSDAASA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.11e-139C2H2 family protein