PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc041637.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 513aa MW: 60954.6 Da PI: 8.0043

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc041637.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.8	6.7e-22	46	137	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 f ++YA++ GFsvrk + +++ ng ++r+f C +egk+++++ + +k++r+r ++r++Cka +++k+++ ++w+vtk+++e Cse_sc041637.1_g020.1 46 FNKKYARMKGFSVRKGRFENK--NGVKKRRDFFCHREGKPDTKEVDYSKQQRNRGSSRCECKAFMRIKLKQineifPEEWQVTKFVTE 131 6689**********98777..9999***************9******************9986555689***** PP FAR1 85 HnHela 90 HnH l Cse_sc041637.1_g020.1 132 HNHILL 137 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MKFLPFDLNE VPMEENIVDE DIDDKENIDE PFVGQCFLSE EEALVFNKKY ARMKGFSVRK 60 GRFENKNGVK KRRDFFCHRE GKPDTKEVDY SKQQRNRGSS RCECKAFMRI KLKQINEIFP 120 EEWQVTKFVT EHNHILLSTQ EVRFLPAYRN ITTEDEKRIL LLKEGGLSVR QIMRVMELEK 180 DVRHGELPFL VKDVHNLFTK LYKENSPNDA RELLEYCKSA KSDHPNFQFA YTLDDENRLE 240 HIFWSQAHCF NWYQKYGDVV VFDTTYKVNS YEMPFDVFVG INNHGRTILL GCALVHNETI 300 KTFRWLFKVD LAIEDVEQKQ MHDTMLEKYR GSYLRSLSPI EEQGHYFLTS FAFKKFQEEF 360 EKAIKYTVQE ENCINFIVKH HKASRMHKEF WDGKVAKCSC KNFEFVGILC RHILSVFIHK 420 DYFEVPSTYW PSRWRRDELQ LDEASPSPQE ESIVDLNSLN DTIDLVERPP KSKAKGRPKK 480 IRKKAFDGDR RIWGVICLRQ TCSQSAIRNS RHF

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MKFLPFDLNE VPMEENIVDE DIDDKENIDE PFVGQCFLSE EEALVFNKKY ARMKGFSVRK  60
GRFENKNGVK KRRDFFCHRE GKPDTKEVDY SKQQRNRGSS RCECKAFMRI KLKQINEIFP  120
EEWQVTKFVT EHNHILLSTQ EVRFLPAYRN ITTEDEKRIL LLKEGGLSVR QIMRVMELEK  180
DVRHGELPFL VKDVHNLFTK LYKENSPNDA RELLEYCKSA KSDHPNFQFA YTLDDENRLE  240
HIFWSQAHCF NWYQKYGDVV VFDTTYKVNS YEMPFDVFVG INNHGRTILL GCALVHNETI  300
KTFRWLFKVD LAIEDVEQKQ MHDTMLEKYR GSYLRSLSPI EEQGHYFLTS FAFKKFQEEF  360
EKAIKYTVQE ENCINFIVKH HKASRMHKEF WDGKVAKCSC KNFEFVGILC RHILSVFIHK  420
DYFEVPSTYW PSRWRRDELQ LDEASPSPQE ESIVDLNSLN DTIDLVERPP KSKAKGRPKK  480
IRKKAFDGDR RIWGVICLRQ TCSQSAIRNS RHF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	471	484	KSKAKGRPKKIRKK
2	473	486	KSKAKGRPKKIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-78	FAR1 family protein