PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc040661.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 302aa MW: 33403.7 Da PI: 7.2883

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc040661.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.7	1.6e-17	126	219	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ ++ ++k+++t +++ Cse_sc040661.1_g010.1 126 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSSKYKLTVFDS 212 99**********998887.8898*********99988888999888899999999***********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc040661.1_g010.1 213 IHNHELE 219 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MDLIPSSSVS SDPSSSITES DRSSFDPSSS ITVSDDVSVT ESASEDVVVS DDVSAKYTEE 60 IVAYEHGDES AAIKKLNALK TPESFSTHSN FDTPGGTVYY IPKVPVDVLL AKGNVFNSVD 120 ECISAYMKYA SKAGFVVRKS CQKRLRSGIV KQKYLVCNRE GCPKGIHVDT LDLENSDKQK 180 RSSNLHITGC KARVMFELIP GSSKYKLTVF DSIHNHELER KEYKHLSKTE RQLTYAEQVF 240 IVKAASVNIG ATRAHHLLTG MKGSYLLVHG TTVDFKNFFR SVNCYIGDSD AQMLIAKMEN 300 RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-09	FAR1 family protein