PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037209.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 521aa MW: 59269.9 Da PI: 9.7872

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037209.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	70.4	2.6e-22	369	418	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 e+s ++++yF+lpi++A+k+L+v+lTvLK+ CR G kRWP+Rk++sl Cse_sc037209.1_g010.1 369 TELSNTVIAQYFHLPIAEACKQLNVGLTVLKQFCRDKGFKRWPYRKLRSL 418 579999******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MIYSIKDFTV IANKDEYRVL KDSAWMIEFD GSTTVRKAAF KPDGFVRHPF ELVAFENLQP 60 TDNKFLIDVI GYVTNVGRTS YQKTGSRNLD FYLANQSFCV YLSDKLYLTS TSSSLLLDDD 120 DIPALKRFKG GASGVNQRKD IVPVDHSVPK PDQSADECGN SSTVEQIAAS ETTSDEHNKN 180 GLKYNSDTEI EEVKADQHSA SKKRKLKKLS VDVDQSVAEI NEEKAGQDAA SKKHMLKKST 240 DDLSVPTPLK STKQKSKKRF VVEDSNTDDE KQIKVKVGGS EKKKLKKKYA ENGGATVDDY 300 TKVIITRLKE ERRRVQENPD YNLSPITKQL RQRNFKARHN KSKNMNLGST TTIESNITDL 360 ARHNRSNITE LSNTVIAQYF HLPIAEACKQ LNVGLTVLKQ FCRDKGFKRW PYRKLRSLDL 420 LISTLQEENG GAIVDDYTKV IITRLKEERR RVQENPNYKL SPTTKKLRRR NFKARYKKIK 480 NMNFAPTTTI EATPLQVIYP SNISDSKEMD GDYDGDNETQ D

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MIYSIKDFTV IANKDEYRVL KDSAWMIEFD GSTTVRKAAF KPDGFVRHPF ELVAFENLQP  60
TDNKFLIDVI GYVTNVGRTS YQKTGSRNLD FYLANQSFCV YLSDKLYLTS TSSSLLLDDD  120
DIPALKRFKG GASGVNQRKD IVPVDHSVPK PDQSADECGN SSTVEQIAAS ETTSDEHNKN  180
GLKYNSDTEI EEVKADQHSA SKKRKLKKLS VDVDQSVAEI NEEKAGQDAA SKKHMLKKST  240
DDLSVPTPLK STKQKSKKRF VVEDSNTDDE KQIKVKVGGS EKKKLKKKYA ENGGATVDDY  300
TKVIITRLKE ERRRVQENPD YNLSPITKQL RQRNFKARHN KSKNMNLGST TTIESNITDL  360
ARHNRSNITE LSNTVIAQYF HLPIAEACKQ LNVGLTVLKQ FCRDKGFKRW PYRKLRSLDL  420
LISTLQEENG GAIVDDYTKV IITRLKEERR RVQENPNYKL SPTTKKLRRR NFKARYKKIK  480
NMNFAPTTTI EATPLQVIYP SNISDSKEMD GDYDGDNETQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	8e-22	Nin-like family protein