PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036623.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 327aa    MW: 36524.9 Da    PI: 7.179
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036623.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.36.2e-32147200255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Cse_sc036623.1_g020.1 147 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 200
                            9****************************************************7 PP
2Myb_DNA-binding45.81.4e-14148199148
                            TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r+rWT  ++  +v+av++lGg+   t+k++ + m+ k +tl ++ks++q+y+
  Cse_sc036623.1_g020.1 148 RMRWTSTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 199
                            89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MFLASKTTLM ASGNEPTSLP DLSLQISPPA ADCTTTDSNS SESDLSHENG LNVFNHQYYQ  60
PPSDMRGFVS HGVQLDQPRL SLGLEMGGFS YPQPHHLMAP LHLPRNGLFV QHQFGNQHYH  120
HQPQIFGHDF KRNSRMGNRV RRIVRAPRMR WTSTLHAHFV HAVQLLGGHE RATPKSVLEL  180
MNVKDLTLAH VKSHLQMYRT VKSTDKGAAG LEDIGMINPR TLLQMKDGLS PFDDNIDDTN  240
NPSRPTTLQT SQREPWSLSM DTHDSSFSSK EYTPNCSTLG AVDAKVDELE ASLNLTGKDK  300
KFGNSIRNKS SDSDPSSDRL LNLEFTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.13e-44G2-like family protein