PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc035730.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 185aa MW: 21052.1 Da PI: 8.2594 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.7 | 2.4e-09 | 11 | 62 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 r+ +E++RR +++ +++L +l+ ++ +s+ s + L +A +YIk+Lq Cse_sc035730.1_g010.1 11 RVDRRTIEKNRRIHMKALYSKLHSLVAHD---SSREmTSLPDQLHEAANYIKKLQ 62 566678**********************8...77777*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence |
MEGNPSSSCS RVDRRTIEKN RRIHMKALYS KLHSLVAHDS SREMTSLPDQ LHEAANYIKK 60 LQIKLEKMNE EKNNLMGIKK LEINNNHKIK CLNMMVGQAR APQIEVRETG SSIEAVLITG 120 VDFQFLFSET IRVIHEEGFD VVNAGFSILN DTVFHTIHAQ VGERYAQEDG ASRIKERLSN 180 IVYGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-46 | bHLH family protein |