PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035373.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 302aa    MW: 34152.6 Da    PI: 4.968
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035373.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-3075133259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++v +tY+ eHnh+
  Cse_sc035373.1_g020.1  75 ADSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPTMVMVTYSCEHNHP 133
                            69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEVGFRTFNV HLEDNQNSPE NSDDSPPSPM FYDTKATSTS SPKRSRRGAH KRVVHVPIKE  60
VEGSRLKGET NAPPADSWAW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRTDPT  120
MVMVTYSCEH NHPWPASRSN NNHHHNAPTS PPTNSTLTTE PTNSNSDDQM EEEPPMLTRK  180
SKHDHELELE LEREAEPEPE TEVEQDKKFT SLEVGSCGPF ASTSDQYAWF SDLDATSSTM  240
LESPMMARDI VEDSDMAMIF SIRDDEESFF ADLDELPECS TVFRRREIEH CGKLAPWCGT  300
TG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.14e-54WRKY family protein