PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc032803.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Trihelix
Protein Properties Length: 294aa    MW: 34734.4 Da    PI: 6.7898
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc032803.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.81.8e-1056136171
               trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                            +Wt++  ++L+++ ++++e+ +++            + ++  ++s++m+erg++ sp+qC++k+ ++++ y ++    +  
  Cse_sc032803.1_g010.1  56 QWTDETARLLVNIISYIGEAESSDDkensrklkemPMIKKCNAISNVMKERGYTFSPQQCEKKFFDMKRTYNELIGLLGTT 136
                            7**************766665543223445555557789999*****************************9876665554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MQAQYQNLYQ PFEQFMGQDQ PSQGEPQINN FTMPASNNFD ELTSILGNVG NASHLQWTDE  60
TARLLVNIIS YIGEAESSDD KENSRKLKEM PMIKKCNAIS NVMKERGYTF SPQQCEKKFF  120
DMKRTYNELI GLLGTTKSCE VVQNPILLDS LMMPTIQKEE VRKLLGSEQL LYHEMWSFHN  180
ANRTYLPRDL ELRRSVFRNL DKEGNRKEMV RNRDQNKRKD LSTRWNEVEE KSLEIQEKML  240
QIEKARYEWM CANRDEDLKV AKMRLENENL RLENARLAYQ LKRQKTVLNV DDNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.12e-35Trihelix family protein