PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032708.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 437aa MW: 51361.6 Da PI: 8.7971

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032708.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.9	9.1e-10	32	80	47	90
FAR1 47 k......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++k+ r+r++ r+gC a+l++kk + +ev+k+e HnH+l+ Cse_sc032708.1_g010.1 32 ShrfgdvKKKQTRKRTSFRCGCSASLTIKKI-GNIYEVKKFEDGHNHPLV 80 144555567888999999***********.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEQGLNEDSN GKSGDSVTDN DISGQSEISD DSHRFGDVKK KQTRKRTSFR CGCSASLTIK 60 KIGNIYEVKK FEDGHNHPLV AEKDMIFLKN SRKMGYTKQH FLYQVSDANF GPAVGFRLMK 120 QVYGGFGRVG TTVIDCKNQK KKISVFIGDR DAQMAVEKLL SRKLHSPIFY VNYYKDQILP 180 EEFETEWDRM INDFKLSDNK WLGDMFNMRE RWILAPHLTL VEFLSRYDTA IEYQRYIERK 240 NDHDSRYKTP KFKTEHPMEK EACKLYTRTL FFDVQDEILG SYKYCIGLSV VQAENMEKYA 300 IRDTEFRNRK SGDNDFDVYQ VDFCKSEMIV QCSCNRYESY GLLCRHAFYV LRMNNVKEFP 360 RNYLKKRWLK NTKPSRSAIP RIIGASDLVR NEVLDMYEIF ESTVDRLVHD LSKMHIYKDK 420 LQELFNQAVI DIPTVPK

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEQGLNEDSN GKSGDSVTDN DISGQSEISD DSHRFGDVKK KQTRKRTSFR CGCSASLTIK  60
KIGNIYEVKK FEDGHNHPLV AEKDMIFLKN SRKMGYTKQH FLYQVSDANF GPAVGFRLMK  120
QVYGGFGRVG TTVIDCKNQK KKISVFIGDR DAQMAVEKLL SRKLHSPIFY VNYYKDQILP  180
EEFETEWDRM INDFKLSDNK WLGDMFNMRE RWILAPHLTL VEFLSRYDTA IEYQRYIERK  240
NDHDSRYKTP KFKTEHPMEK EACKLYTRTL FFDVQDEILG SYKYCIGLSV VQAENMEKYA  300
IRDTEFRNRK SGDNDFDVYQ VDFCKSEMIV QCSCNRYESY GLLCRHAFYV LRMNNVKEFP  360
RNYLKKRWLK NTKPSRSAIP RIIGASDLVR NEVLDMYEIF ESTVDRLVHD LSKMHIYKDK  420
LQELFNQAVI DIPTVPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	2e-27	FAR1 family protein