PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031641.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 488aa MW: 55562.5 Da PI: 4.4441

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031641.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.6	3.5e-51	22	148	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 ppGfrFhPtdeelv +yLk+k+ +++l++ ++i evd+yk++P++Lp +k+k+++++w+fFs+rd++y++g r++rat +gyWkatg Cse_sc031641.1_g030.1 22 PPGFRFHPTDEELVLYYLKRKICRRSLKM-DIIGEVDVYKWDPEELPgqSKLKSGDRQWFFFSPRDRRYPNGARSSRATMNGYWKATG 108 9**************************.99**********964489999***************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 kd+++++ k++ vg kktLv+y+grap+g +tdWvmhey++ Cse_sc031641.1_g030.1 109 KDRTIKR-KSSSVGNKKTLVYYQGRAPTGLRTDWVMHEYTM 148 **9.8999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MGSDMIDLVN VKKSKSGGKC FPPGFRFHPT DEELVLYYLK RKICRRSLKM DIIGEVDVYK 60 WDPEELPGQS KLKSGDRQWF FFSPRDRRYP NGARSSRATM NGYWKATGKD RTIKRKSSSV 120 GNKKTLVYYQ GRAPTGLRTD WVMHEYTMDE EELRRCPYAQ DHYVLYKVFK KSGPGPKNGE 180 QYGAPFIEEE WSDDDCLDVE TLLVQKHQQI PINDFKNARE EEVPLSNDDI EFLNRIFEPE 240 VLPQLPQITE KANMGLEPEP QPLVVEEDFL EMNDLLGPEP EKCSFDSLSE FDFYQEADAF 300 GSRHFELQPA YTDNLEFGPN GSGTRTAAEA DAFGSQHFEL QPAYTDNLEF GPANSGLVSE 360 VVNHDNDELQ MSYDLWNHDQ GESSITTSYQ NVSQASSGVV IEENPGKLEY NVNQCPQTNM 420 DNGTNSWLSS TLWSFVDSIP TTPASAAESS ALVNRAFXNQ NHQDQVVVAR VLFIFLLLEY 480 CLLSSLYS

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MGSDMIDLVN VKKSKSGGKC FPPGFRFHPT DEELVLYYLK RKICRRSLKM DIIGEVDVYK  60
WDPEELPGQS KLKSGDRQWF FFSPRDRRYP NGARSSRATM NGYWKATGKD RTIKRKSSSV  120
GNKKTLVYYQ GRAPTGLRTD WVMHEYTMDE EELRRCPYAQ DHYVLYKVFK KSGPGPKNGE  180
QYGAPFIEEE WSDDDCLDVE TLLVQKHQQI PINDFKNARE EEVPLSNDDI EFLNRIFEPE  240
VLPQLPQITE KANMGLEPEP QPLVVEEDFL EMNDLLGPEP EKCSFDSLSE FDFYQEADAF  300
GSRHFELQPA YTDNLEFGPN GSGTRTAAEA DAFGSQHFEL QPAYTDNLEF GPANSGLVSE  360
VVNHDNDELQ MSYDLWNHDQ GESSITTSYQ NVSQASSGVV IEENPGKLEY NVNQCPQTNM  420
DNGTNSWLSS TLWSFVDSIP TTPASAAESS ALVNRAFXNQ NHQDQVVVAR VLFIFLLLEY  480
CLLSSLYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-107	NAC family protein